The serious threat of pesticides residue in food and natural environments to human health and ecosystems highlights the essentiality of developing highly sensitive detection methods. In this study, Fe
3
O
4
/TiO
2
/Ag-based surface-enhanced Raman spectroscopy (SERS) substrate was developed and it was employed to detect pesticides residue. The ferric ferrous oxide (Fe
3
O
4
) nanoparticles were synthesized by hydrothermal method, titanium dioxide (TiO
2
) was prepared
by
sol-gel method, and silver (Ag) nanoparticles were produced by chemical reduction. The Fe
3
O
4
/TiO
2
/Ag were obtained as SERS-active substrate for thiophanate-methyl (TM) detection. The Fe
3
O
4
/TiO
2
/Ag nanocomposites were analyzed by X-ray diffraction (XRD), Scanning electron microscope (SEM), X-ray photoelectron spectroscopy (XPS), Ultraviolet-Visible (UV), infrared spectra (IR), and cyclic voltammetry (CV). The SERS properties of Fe
3
O
4
/TiO
2
/Ag was evaluated
via
TM as a model and the nanocomposites showed significant SERS enhancement. The enhancement mechanisms included electromagnetic and chemical pathways were explored in detail. It was demonstrated that a nice linear relationship between the intensities of SERS peak and the logarithm of TM concentrations was obtained, ranging from 10
-9
to 10
-3
M, with the detection limit of 10
-10
M. In real sample tests (tap water and peaches), recovery rates of 97.4%-105.6% confirmed the accuracy and reliability which established a facile approach to detect analyte in agriculture, environment, food, industry, and biomedicine fields.